课程信息

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学生职业成果

67%

完成这些课程后已开始新的职业生涯

60%

通过此课程获得实实在在的工作福利

25%

加薪或升职
可分享的证书
完成后获得证书
100% 在线
立即开始,按照自己的计划学习。
可灵活调整截止日期
根据您的日程表重置截止日期。
完成时间大约为14 小时
英语(English)
字幕:英语(English)

学生职业成果

67%

完成这些课程后已开始新的职业生涯

60%

通过此课程获得实实在在的工作福利

25%

加薪或升职
可分享的证书
完成后获得证书
100% 在线
立即开始,按照自己的计划学习。
可灵活调整截止日期
根据您的日程表重置截止日期。
完成时间大约为14 小时
英语(English)
字幕:英语(English)

提供方

丹麦技术大学 徽标

丹麦技术大学

教学大纲 - 您将从这门课程中学到什么

1

1

完成时间为 3 小时

From sampling to sequencing

完成时间为 3 小时
10 个视频 (总计 112 分钟), 13 个阅读材料, 2 个测验
10 个视频
Welcome14分钟
Introduction to metagenomics10分钟
Considerations and controls for metagenomic/microbiome projects10分钟
Introduction to antimicrobial resistance11分钟
Sampling for surveillance18分钟
Sampling at farms and slaughterhouses14分钟
Sample storage2分钟
Isolation of DNA from complex samples10分钟
Sample processing for viral metagenomics7分钟
Sequencing platforms12分钟
13 个阅读材料
Glossary20分钟
Get started !5分钟
Introduction to metagenomics2分钟
Considerations and controls for metagenomic/microbiome projects2分钟
Introduction to antimicrobial resistance2分钟
Sampling for surveillance5分钟
Sampling at farms and slaughterhouses2分钟
Sample storage2分钟
Isolation of DNA from complex samples2分钟
Notes on library preparation5分钟
Sequencing platforms10分钟
Assessment case-study - part 15分钟
Assessment case study - part 22分钟
2 个练习
Module 1 assessment - part 18分钟
Module 1 assessment - part 212分钟
2

2

完成时间为 3 小时

FROM READS TO RESULTS

完成时间为 3 小时
6 个视频 (总计 64 分钟), 11 个阅读材料, 1 个测验
6 个视频
Overview of available metagenomic analysis tools7分钟
MGmapper13分钟
ResFinder database5分钟
Demo of metagenomic classification using KRAKEN16分钟
Real example of metagenomic analysis - lessons learned14分钟
11 个阅读材料
General introduction to bioinformatics analysis of metagenomics data5分钟
Overview of available metagenomic analysis tools10分钟
MGmapper10分钟
MGmapper - Best mode vs Full mode10分钟
ResFinder database3分钟
Assessment case-study - part 310分钟
Samples sheet10分钟
Report A - FastQC results10分钟
Report B - MGmapper results10分钟
Report C - KRAKEN results10分钟
Report D10分钟
1 个练习
Module 2 assessment24分钟
3

3

完成时间为 8 小时

Interpretation of results and potential of metagenomics for surveillance

完成时间为 8 小时
6 个视频 (总计 81 分钟), 16 个阅读材料, 6 个测验
6 个视频
Metagenomic assembly and binning: reconstructing genomes from reads15分钟
Application of metagenomics in surveillance - methods (part 1)10分钟
Application of metagenomics in surveillance - methods (part 2)16分钟
Application of metagenomics in surveillance - opportunities and challenges21分钟
Farewell3分钟
16 个阅读材料
Virtual Machine setup1小时
Analysis and visualization of read count data10分钟
Metagenomic assembly and binning: reconstructing genomes from reads10分钟
Application of metagenomics in surveillance - methods10分钟
Potential of metagenomics for surveillance10分钟
Challenges of metagenomics for surveillance10分钟
Assessment case-study - part 45分钟
Report D10分钟
Epidemiology sheet and Report E10分钟
Introduction5分钟
Final quiz - section I - Sampling10分钟
Final quiz - section II - Quality control30分钟
Final quiz - section III - Bioinformatics analysis of metagenomics30分钟
Final quiz - section IV - Interpretation of metagenomics results10分钟
Final quiz - section V - Final quiz - section V - Analysis of metagenomics results in a surveillance context10分钟
Extra material for final assessment10分钟
6 个练习
Module 3 assessment10分钟
Final quiz - section I - Sampling18分钟
Final quiz - section II - Quality control30分钟
Final quiz - section III - Bioinformatics analysis of metagenomics30分钟
Final quiz - section IV - Interpretation of metagenomics results30分钟
Final quiz - section V - Analysis of metagenomics results in a surveillance context30分钟

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