The field of metagenomics and whole community sequencing is a promising area to unravel the content of microbial communities and their relationship to disease and antimicrobial resistance in the human population. Bioinformatic tools are extremely important for making sense out of metagenomics data, by estimating the presence of pathogens and antimicrobial resistance determinants in complex samples. Combined with relevant explanatory data, metagenomics is a powerful tool for surveillance.
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Metagenomics applied to surveillance of pathogens and antimicrobial resistance
丹麦技术大学课程信息
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英语（English）
字幕：法语（French）, （欧洲人讲的）葡萄牙语, 俄语（Russian）, 英语（English）, 西班牙语（Spanish）
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可灵活调整截止日期
根据您的日程表重置截止日期。
可分享的证书
完成后获得证书
100% 在线
立即开始，按照自己的计划学习。
完成时间大约为15 小时
英语（English）
字幕：法语（French）, （欧洲人讲的）葡萄牙语, 俄语（Russian）, 英语（English）, 西班牙语（Spanish）
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丹麦技术大学
DTU focuses on research in technical and natural sciences that contributes to the development of society. As an industrially orientated university, our goal is to supply high-level international research based on combining theory with constructing models and empirical methods.
教学大纲 - 您将从这门课程中学到什么
完成时间为 4 小时
From sampling to sequencing
In this module, you will be introduced to metagenomics, some of the considerations and controls that need to be in place in a metagenomics study, and to the topic of antimicrobial resistance.
完成时间为 4 小时
10 个视频 （总计 112 分钟）, 13 个阅读材料, 2 个测验
完成时间为 3 小时
FROM READS TO RESULTS
In this module, you will be introduced to the basics of bioinformatics analysis of metagenomics data, including the different types of analysis possible and the different algorithms available. You will then learn about quality control, MGmapper and KRAKEN (two freely available bioinformatics pipelines), and ResFinder (a database of antimicrobial resistance genes). An example from a real study will demonstrate some of the challenges of a bioinformatics analysis.
完成时间为 3 小时
6 个视频 （总计 64 分钟）, 11 个阅读材料, 1 个测验
完成时间为 8 小时
Interpretation of results and potential of metagenomics for surveillance
In this module you will learn about two different approaches to analyse and interpret sequence reads - classification and assembly. You will see examples of methods to vizualize read counts and to analyze metagenomics together with explanatory data. Last, you will learn the potential of metagenomics for the development of a future global and integrated surveillance, and the challenges you may encounter during that process
完成时间为 8 小时
6 个视频 （总计 81 分钟）, 16 个阅读材料, 6 个测验
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来自METAGENOMICS APPLIED TO SURVEILLANCE OF PATHOGENS AND ANTIMICROBIAL RESISTANCE的热门评论
由 MQ 提供Apr 16, 2020
This course proved helpful in anticipating the very basic idea of metagenomics analysis along with the useful explanation of data interpretation to dig out appropriate results.
由 IA 提供Oct 28, 2020
I really enjoyed the course. Covered all aspects of a metagenomics project in surveillance of pathogens and AMR, from study design to data analysis and result interpretation.
由 MD 提供May 30, 2019
I learned a lot, they covered complex analysis topics in a clear, understandable way. I would recommend this course to anyone interested in microbial metagenomic analysis.
由 DD 提供Aug 1, 2020
The course was well structured however I had little difficulty in doing last assignments I think some session on problem solving should be done before giving assignments.
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