3D SARS-CoV-19 Protein Visualization With Biopython

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Coursera Project Network
在此指导 项目中,您将:

Biological sequence/ Data manipulation with Biopython

Query Biological Databases using Biopython & web-scraping

Create an interactive 3D model of SARS-CoV-19 Protein

Clock2 hours
Intermediate中级
Cloud无需下载
Video分屏视频
Comment Dots英语(English)
Laptop仅限桌面

In this project you will create an interactive three-dimensional (3D) representation of SARS-CoV-19 (Coronavirus) protein structures & publication-quality pictures of the same, understand properties of SARS-CoV-19 genome, handle biological sequence data stored in FASTA & PDB (Protein Data Bank) and XML format, and get insights from this data using Biopython. This hands-on project will also give you a glimpse of tasks a Bioinformatician performs on a daily basis, along with the up-to-date concepts and database use cases in the field of Medical Research and Human genetics. In this project, we will also cover basics about important databases used by biologists and biotechnologists, along with the type of sequence data we can access and visualize from these databases using Biopython & Jupyter notebook.

您要培养的技能

SARS-CoV-19BiopythonPython ProgrammingBioinformaticsBiotechnology

分步进行学习

在与您的工作区一起在分屏中播放的视频中,您的授课教师将指导您完成每个步骤:

  1. Introduction to Biopython

  2. Understand FASTA file format

  3. Sequence manipulation using Biopython

  4. Transcription & Translation studies

  5. Perform Basic Local Alignment using NCBI-BLAST

  6. Reading PDB file

  7. Visualizing SARS-CoV-19 Protein structures

指导项目工作原理

您的工作空间就是浏览器中的云桌面,无需下载

在分屏视频中,您的授课教师会为您提供分步指导

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